In this link it looks like someone cleaned up the factory manual. May be good for you as a reference.
AVC-R Printable
As for the one open port referenced as connecting to an orifice.......this just a vent. take a look at some of the stock solenoids (forgot off hand which one) and you will see it has a little filter but no line hooked up. What ApeXi is looking for you to do is to run a line to a clean spot someplace where dirt and water can not enter into the solenoid and screw it up. You could also get a brass sintered filter (also called a muffler) like the ones supplied with the MAC valve solenoids that the AEM boost sensor uses.
Here's an image of a brass sintered filter
If looking to get a filter you pretty much only need to know the thread size and pitch of female ports in the solenoid or take one of the supplied brass fittings and use that for reference when purchasing.