Update:
I am kinda resurrecting my own thread here since I had been so adamant about OPs not coming back and giving the final word on what got their car fixed so here it goes.
I noticed after gapping the stock plugs down to around .35 that I had pretty poor idle quality and even worse the car would stumble and run awful at my normal town driving range which is around 40mph in 4th gear running right around 2k-ish RPMs. The car did seem to perform decent at WOT, but since most of the time driving the car as my daily driver it doesn't spend a whole lot of time at WOT but does spend a lot of time at that 40mph range so something had to give.
I was so disgusted with the car at this point I was seriously considering changing it all back to stock just so I could have a car that didn't need worked on or tweaked every other day.
I took the plugs back out and gapped them back out closer to the stock gap range about .48-.50. I wadded the wires back up with another healthy dose of di-electric and went for a test drive. The drivability was instantly better, and it also seemed to perform quite well at WOT as well.
I noticed the boost seemed a little bit lower than when I first set the wastegate, possibly from changing the supply line to the AGP gate out to that larger size hose like AGP reccomends. When I first set it up it was around the 17-18 spike range falling off down to around 14-15 where as now it spikes no higher than 16 usually and falls to around the 14 range at high revs. I know I can do more than that safely, but I really don't want to push it without a wideband or anything to monitor EGTs so I am content with the lower levels right now. Not to mention traction on street tires now that the car is running healthy is already a joke.
In conclusion I believe my initial problem was either a spark plug wire firing off occasionally under WOT or that smaller line ran to the AGP gate making it not open quick enough giving me just an instant of overboost fuel cut. In trying to repair the issue I created another issue by gapping the stock plugs down which gave me horrible drivabilty and idle quality. I can now for the first time since I started modding the car say I am truly happy with how it runs both for easy driving(once you get used to driving around part-throttle-boost) and under a little more spirited driving instances.
Thank you all that gave me ideas and advice along the way, it was much appreciated.
